Hawaiian Geothermal Fumaroles Contain Diverse and Novel Viruses

editorAstrobiology1 hour ago6 Views

Hawaiian Geothermal Fumaroles Contain Diverse and Novel Viruses

A) Subcluster of viral genomes within the family Microviridae. Network constructed using vConTACT3 and visualized in Cytoscape. Reference nodes are colored by genus (RefSeq and vConTACT3 predictions), while fumarole viruses are colored by sample site. Edges represent genesharing strength. The blue node (phiX174) forms a weakly resolved clade with fumarole viruses in the maximum-likelihood phylogeny based on major capsid protein amino acid sequences. B) Pairwise genome comparisons of RefSeq and fumarole Microviridae using local alignment (MMseqs2). The top row and left column indicate predicted genus assignments (vConTACT3) for fumarole and RefSeq viruses. The top-left quadrant shows RefSeq–RefSeq comparisons; the top-right shows fumarole–RefSeq comparisons (RefSeq colored by genus). The second row (genome source) is colored by fumarole sample site. The star denotes comparisons involving the phiX174 RefSeq genome. — biorxiv.org

Microbial communities of geothermal habitats are central to understanding the evolution of life on Earth. Metagenomics has provided insight into the role of viruses in shaping microbial diversity of complex environments.

However, identification of novel viruses is constrained by lack of marker genes and low nucleotide similarities between related viral taxa. While microbial and viral diversity have been explored in terrestrial hot springs and hydrothermal vent systems, other volcanic features remain underexplored.

Fumaroles (steam vents) are geothermal features that heat groundwater with magma, releasing steam and volcanic gases such as CO2 and H2S. Comparatively physicochemically dynamic to hot springs, fumarole temperatures and gas emissions rapidly fluctuate with volcanic activity.

Here, we describe viruses identified metagenomically from microbial mats hosted near basaltic fumaroles on the Big Island of Hawai`i. To our knowledge, this is the first systematic survey of fumarole viruses. Our utilization of a sensitive profile-based approach for identification reveals high viral diversity in fumaroles, resulting in estimation of two undescribed order-level clades of Caudoviricetes (tailed phages). Viral metabolic genes provide evidence of viral-mediated adaptation of microbes to fumarole conditions.

We describe patterns of viral diversity that diverge from the Bank model of viral ecology, hinting at viral dispersal between biofilms and high viral richness and evenness. Lastly, we provide a description of the first terrestrial geothermal environment dominated by Microviridae, previously only described in viral communities of deep ocean hydrothermal vents. This study offers important findings for exploration of viral ecology in extreme environments.

Hawaiian Geothermal Fumaroles Contain Diverse and Novel Viruses, biorxiv.org (open access)

Astrobiology, genomics, extremophile,

Explorers Club Fellow, ex-NASA Space Station Payload manager/space biologist, Away Teams, Journalist, Lapsed climber, Synaesthete, Na’Vi-Jedi-Freman-Buddhist-mix, ASL, Devon Island and Everest Base Camp veteran, (he/him) 🖖🏻

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